PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020698411.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 240aa    MW: 27173.6 Da    PI: 5.8084
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020698411.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.000316082123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_020698411.2 60 YSCSFCWREFRSAQALGGHMNVH 82
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MDQTRNWMWE ISKNYSNRPI YINSVLTSPS ASPFASWEEF AFAKDSAGDL WDCVWPPRSY  60
SCSFCWREFR SAQALGGHMN VHRRDRARLK LEASSSSNEE ENSSPNPNPN PSPKSVAAAS  120
YSLQTQENCS KNMLVSASSF PNPPPEVSID LKLGEMDCKR KTSEACGVDK DSSYCYKKLK  180
STDDLMFGLS MKSVRDDQLQ LLRSDEVLKL RTCQVEELDL ELRLGHPPKI KQDCSIILIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.14e-24C2H2 family protein