PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020698639.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 195aa MW: 22131.7 Da PI: 4.7824

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020698639.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	89.3	7e-28	9	124	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGf+F P+d+elv+++L++kv++ ++i+++d++ ++PwdL+ k++++ + wyfF++r + nr t +g Wk+ g d++v++ XP_020698639.1 9 LPPGFHFLPSDDELVNHFLHNKVTSLFPFHPSIIPTLDLHLFDPWDLHcKALNGAGNYWYFFTQRTH--------NRETPNGCWKQVGVDEPVKE 95 79********************998555578**********9778888999*99854........899***********98 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 vg++kt+vf g+ + k dWvm+e+ l XP_020698639.1 96 -----VGIRKTFVFKAGNGLEEMKKDWVMDEFCL 124 .....*************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MAEQAAGHLP PGFHFLPSDD ELVNHFLHNK VTSLFPFHPS IIPTLDLHLF DPWDLHCKAL 60 NGAGNYWYFF TQRTHNRETP NGCWKQVGVD EPVKEVGIRK TFVFKAGNGL EEMKKDWVMD 120 EFCLVDSFGS SSSSRKSSQK KGYSTVADGD KWVVCRVYET CCGFQPSSEE DGTELSCLDQ 180 VFLSFDDYDE VSFPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	9e-53	NAC family protein