PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020698669.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 213aa    MW: 23521.3 Da    PI: 6.5791
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020698669.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.0006983105123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_020698669.1  83 FTCNYCLRKFFSSQALGGHQNAH 105
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MNPPSCHSSS SKIQDELHMN SLKTDQSADN SSNITGQIAC SPSISTQTPH SMSLSLSLCL  60
PINHDSPSST VESSNEAHRR RMFTCNYCLR KFFSSQALGG HQNAHKRERT LAKRVTTAEQ  120
FTHTIVSMAS FPLHGGLQAH GSLHQGFFGT QEMRRSGMFE QGLFEGIPAL MEEEEVGVIW  180
PGSFRQKVVP VSELNYGEKE AGEVDEPDLT LRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.13e-28C2H2 family protein