PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020698705.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WOX

Protein Properties

Length: 214aa MW: 24343.3 Da PI: 7.2753

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020698705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.1	4.7e-21	6	66	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t+eql +Lee+++ r+p+a+++++++++l +++ ++V++WFqN++a+e++ XP_020698705.1 6 STRWCPTPEQLMILEEMYRTgVRTPNASQIQQITSHLsyygKIEGKNVFYWFQNHKARERQ 66 58***************99************************************97 PP
2	Wus_type_Homeobox	121.6	3.2e-39	6	67	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +tRW+PtpeQ++iLee+y++G+rtPn+++iq+it++L+ yGkie+kNVfyWFQN+kaRerqk XP_020698705.1 6 STRWCPTPEQLMILEEMYRTGVRTPNASQIQQITSHLSYYGKIEGKNVFYWFQNHKARERQK 67 79***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MPQVPSTRWC PTPEQLMILE EMYRTGVRTP NASQIQQITS HLSYYGKIEG KNVFYWFQNH 60 KARERQKLRR RLTKQQQQQS MPPFSQNSFH FHNLEDGHSL PLPDDSSQLF YGHQMHPQFL 120 QHEGGFQEPA SHGLDLLRRL EAGGHQEEAT SSSNGSTWPC GCEWMTLMDP SFGERPLPCC 180 KPPKTLELFP TTSTGGLKDE CSISKSSSCS ASTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28610.1	1e-35	WOX family protein