PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020698788.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Dof
Protein Properties Length: 319aa    MW: 33951 Da    PI: 8.3015
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020698788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof119.51.2e-3778135360
          zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 
                     e+alkcprCdstntkfCy+nnysl+qPr+fCk+CrryWt+GGalr vPvGgg+r+nk+
  XP_020698788.1  78 EAALKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKR 135
                     6789****************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MVFSSAPLYV DPPNWNQQGS NNIVVDEEDV HQLPQSHEAA ASGPAPHQVA AGGNTSRPEP  60
VVVSMAERAR LAKLPQVEAA LKCPRCDSTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGA  120
LRSVPVGGGC RRNKRGNKSS SCKPSAPAPI TPSASTSSAA AGVFRTAPPQ FLAPWHHLPD  180
YGFPHGIQQP IDHTMQENMG LEQWRIQQFP FLGGLVEPSL PTAAMVPGLY PFEGELGGGH  240
GKIMSTVKME ESSQAAAAAA ATAATTAANM PRQFFNVGRN DGQIWPGGGD SGSGEGHGGR  300
WISGEHLSGF SSSSTGNLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.17e-42Dof family protein