PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020698998.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 415aa MW: 46456.9 Da PI: 7.9558

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020698998.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.7	5.4e-33	44	98	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHerFve v+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl XP_020698998.2 44 KPRLKWTPELHERFVETVNQLGGADKATPKTVMRLMGIPGLTLYHLKSHLQKYRL 98 79****************************************************8 PP
2	Myb_DNA-binding	64.1	2.6e-20	46	97	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e++v+ v+qlGg t+kt++r mg g+tl+++ks++qky+ XP_020698998.2 46 RLKWTPELHERFVETVNQLGGAdkaTPKTVMRLMGiPGLTLYHLKSHLQKYR 97 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MYHLNHSSNN LISSRESFSP ERNLYLQAGN GPGDSRLFLS TDAKPRLKWT PELHERFVET 60 VNQLGGADKA TPKTVMRLMG IPGLTLYHLK SHLQKYRLCK NLQAQTSSRT AKNGSAAAPD 120 RTSEGSGSLV NNINVGHHNN KTLQINEALQ MQMEVHKRLN EQMEVQRHLQ MRIEAQGKYL 180 QSVLEKAHTT LEIQNLVSAG HEVAKVHPDE LVSKVSNECF TSGFLGLGET NGMEILQGHS 240 AQLVDCSMDS CLTSCEGSQK DEDMYNKNIK LQCYHSNLSS RTKEKQEDVR FEQINSGWWR 300 GELNGHKTFS QSNASGNCTL PVSKGSSILS MSIANQRETT ERSKTSETKC RQIDKYKSDL 360 EGPSYKRAAV QQEKSKNFND LGMPCATAQL DLNARDENNA AQNCKEFDLN GFNWS

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MYHLNHSSNN LISSRESFSP ERNLYLQAGN GPGDSRLFLS TDAKPRLKWT PELHERFVET  60
VNQLGGADKA TPKTVMRLMG IPGLTLYHLK SHLQKYRLCK NLQAQTSSRT AKNGSAAAPD  120
RTSEGSGSLV NNINVGHHNN KTLQINEALQ MQMEVHKRLN EQMEVQRHLQ MRIEAQGKYL  180
QSVLEKAHTT LEIQNLVSAG HEVAKVHPDE LVSKVSNECF TSGFLGLGET NGMEILQGHS  240
AQLVDCSMDS CLTSCEGSQK DEDMYNKNIK LQCYHSNLSS RTKEKQEDVR FEQINSGWWR  300
GELNGHKTFS QSNASGNCTL PVSKGSSILS MSIANQRETT ERSKTSETKC RQIDKYKSDL  360
EGPSYKRAAV QQEKSKNFND LGMPCATAQL DLNARDENNA AQNCKEFDLN GFNWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-101	G2-like family protein