PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020699020.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 246aa MW: 28253.8 Da PI: 6.3745

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020699020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.1	4.2e-50	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+v+yL+++++++ l++ +i+e+d+yk++PwdLp k+ +++ewyfF++rd+ky++g+r+nra+ +gyWkatg dk+v+ + XP_020699020.1 14 LPPGFRFHPTDEELLVHYLCRRASHQLLPV-PIIAELDLYKYNPWDLPDKALFGTREWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVTPA 107 79*************************9.88***********77778999*********************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g+kk Lvfy+g+ pkg ktdW+mheyrl XP_020699020.1 108 gYSRPIGIKKALVFYDGKPPKGAKTDWIMHEYRL 141 66788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MGRRIGDAEA ELNLPPGFRF HPTDEELLVH YLCRRASHQL LPVPIIAELD LYKYNPWDLP 60 DKALFGTREW YFFTPRDRKY PNGSRPNRAA GRGYWKATGA DKPVTPAGYS RPIGIKKALV 120 FYDGKPPKGA KTDWIMHEYR LADANRSARR NGSLRLDDWV LCRLYNKKKG WERIPKEETD 180 LTEDSFRTPE SDIELPDLDD LGHEAVDMNR SSGAAQLPPA APAIKEEYDW YSDLNLEDLQ 240 NSFGPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	4e-89	NAC family protein