PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020699062.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YC
Protein Properties Length: 161aa    MW: 18175.4 Da    PI: 4.2502
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020699062.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC114.36.3e-3643142399
           NF-YC   3 ksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvd 94 
                     + +w++q   +e++tdf+++++Pl  ik+i+ adedv ++s eaPvll++ace+filelt + w ha++  rrt+kk di aav++td  dflv 
  XP_020699062.1  43 RCYWADQyreMEETTDFEKQRIPLGTIKRIMMADEDVDIVSNEAPVLLARACEMFILELTHKGWAHADQRCRRTIKKEDIIAAVNETDYCDFLVP 137
                     579*999999************************************************************************************9 PP

           NF-YC  95 ivprd 99 
                     ++ ++
  XP_020699062.1 138 TITTE 142
                     88776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MDGQGHNRPP PPSGDVPHLP NFAADADPNL YPEQVVHQPQ PGRCYWADQY REMEETTDFE  60
KQRIPLGTIK RIMMADEDVD IVSNEAPVLL ARACEMFILE LTHKGWAHAD QRCRRTIKKE  120
DIIAAVNETD YCDFLVPTIT TEEPTEPDSF ELATGPADLL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.32e-35NF-YC family protein