PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020699509.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TCP

Protein Properties

Length: 243aa MW: 25643.6 Da PI: 7.3492

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020699509.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.8	7.9e-38	31	109	2	79
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesss 79 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG ++d++ti+WLlqqa+p+i+++tgt++++as+ a++ XP_020699509.2 31 APKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGNKSDGETIQWLLQQAEPSIIAATGTGTIPASALaAAAAAA 109 789******************************************************************8774333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MDSSKIPYQN QDEVRESPFS VEKDDQRKQL APKRSSNKDR HTKVDGRGRR IRMPALCAAR 60 IFQLTRELGN KSDGETIQWL LQQAEPSIIA ATGTGTIPAS ALAAAAAAAS SIPVPSTPAG 120 LHPRLHDPPT ATRPNWAAGL WPPQPPSPVP PIGGFGLTGL ELPGTNIGQM SFASLLSGHG 180 HHIPGLELGL SQDGHIGVLN PHALSQFYLQ MGQGRGGGGG GSDDQLRNQN QSHGGKDDSD 240 ESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	9e-56	TCP family protein