PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020699662.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Dof
Protein Properties Length: 280aa    MW: 30577 Da    PI: 8.9555
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020699662.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.92.5e-393696262
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    ke++l+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ss
  XP_020699662.1 36 KEQSLNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSS 96
                    57899*****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MDAQWTTQGI GVVKEVEISN TRQPQLQAEK RVRPYKEQSL NCPRCNSTNT KFCYYNNYSL  60
SQPRYFCKTC RRYWTEGGSL RNVPVGGGSR KNKRSSLANN SSSNPTTMTT SLVSLTSPNL  120
QPTEPIPTVQ IPIASSKFYQ GSGQDLNLSF QNQSLAHHDQ LGAASGSISA MELLRSGISA  180
KGFAPFPAAP GSVFGSGFGF QELMRQSNLK LPLDHHGRFS GSMHQMQEGG GGRLLFPFED  240
LKQVHVNNGG HEEEDNGVVQ EQGDPGLFWN GANGRGGGTW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.22e-45Dof family protein