PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020699753.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 156aa    MW: 17995.6 Da    PI: 10.233
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020699753.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.14e-5481331128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     +ppGfrFhPtdeel+ +yL++++ +++l++ ++i+evdiyk++PwdLp+k+  +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+++s 
  XP_020699753.1   8 MPPGFRFHPTDEELILHYLRNRALASPLPV-SIIAEVDIYKFDPWDLPAKAVFGEREWYFFSPRDRKYPNGVRPNRAAASGYWKATGTDKPIIS- 100
                     79****************************.89***************8777899***************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++e++g+kk Lvfy+gr pkg ktdW+mheyrl
  XP_020699753.1 101 RNENIGVKKALVFYTGRPPKGLKTDWIMHEYRL 133
                     8899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MTNPATQMPP GFRFHPTDEE LILHYLRNRA LASPLPVSII AEVDIYKFDP WDLPAKAVFG  60
EREWYFFSPR DRKYPNGVRP NRAAASGYWK ATGTDKPIIS RNENIGVKKA LVFYTGRPPK  120
GLKTDWIMHE YRLADSPNNK SYKPIRLGDH SMRVSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.14e-78NAC family protein