PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020699808.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

MYB

Protein Properties

Length: 231aa MW: 26786.4 Da PI: 10.1075

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020699808.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.4	1.4e-17	6	51	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v+++G+ +W+tIa++++ gR++k+c++rw++ XP_020699808.2 6 RGHWRPGEDEKLRQLVEEFGPQNWNTIAEKLQ-GRSGKSCRLRWFNQ 51 899***************************.*********996 PP
2	Myb_DNA-binding	60	5.2e-19	58	101	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ XP_020699808.2 58 RRPFTEEEEERLLTAHRIHGNK-WALIARLFP-GRTDNAVKNHWHV 101 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MKTCPRGHWR PGEDEKLRQL VEEFGPQNWN TIAEKLQGRS GKSCRLRWFN QLDPRINRRP 60 FTEEEEERLL TAHRIHGNKW ALIARLFPGR TDNAVKNHWH VIMARRQREK AKFLNRNSSS 120 SAWPAFSTFT LTSLPGTDQK RPNYGSLESS HYMNIPLLSF YDSYRVCSFS GSGMMRNMQE 180 VLRLGCNSTR EILSSNDRGG IQYLEEDGGK ATLMRRKDVP YIDFLGVGKD C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	3e-69	MYB family protein