PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020699809.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 213aa    MW: 23769.4 Da    PI: 4.7686
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020699809.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.3e-184090155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + ykGVr +   grWv+e+r+p   +k+ r++lg+f t+e+Aa+a++ a+++l+g
  XP_020699809.2 40 PVYKGVRLRG-AGRWVCEVREP---NKKSRIWLGTFPTPEMAARAHDVAALALRG 90
                    68*******9.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MDTVIDELFF EEDEEEYATV SSAPPKRRAG RTKFRETRHP VYKGVRLRGA GRWVCEVREP  60
NKKSRIWLGT FPTPEMAARA HDVAALALRG RQACLNFADS ARLLPIPPAP ASPRSIQRAA  120
AMAAEAFRPR PDHEQQEEAP PSDQTHTEPE SSTAQDDAFS DVMDFDGYNY YADMLSTDSS  180
MYFPTGLTAA GGGVFGWDDG EWRGDMPLWS HSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.16e-34ERF family protein