PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020700144.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family E2F/DP
Protein Properties Length: 255aa    MW: 29162.8 Da    PI: 10.4581
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020700144.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP74.98.1e-2427103471
         E2F_TDP   4 ksLrlltqkflklleksee.givtlnevakeLvse............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     ++Lr +++    +++k+++ g++t+neva+e++++            d+kn+rRR+YD++NVL a+n+i+k +k+ei+w+g
  XP_020700144.1  27 WGLRRFSKI---VCQKVQSkGRTTYNEVADEIIADlatlnkssefefDEKNIRRRVYDAFNVLLAINVIAK-DKKEIHWIG 103
                     79*******...****9999***************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MLARKKMATS WLLKNKIKKK VSRIIGWGLR RFSKIVCQKV QSKGRTTYNE VADEIIADLA  60
TLNKSSEFEF DEKNIRRRVY DAFNVLLAIN VIAKDKKEIH WIGFPNTSTK ALEDLKRRHM  120
NVTNRIHEKA NYLRELEAKA FDIRKLIVRN QHMHCSGNAS SEGVALPFLL VQTNPKATVE  180
IEISQDMQLV HFDFNGSPFS LHDEAAILKM MRCPQSAAKN QFSCSPARAL NSIRDENGKP  240
MKPASFSWNS ESLTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.13e-79E2F/DP family protein