PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020700162.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 149aa    MW: 16727.2 Da    PI: 6.8357
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020700162.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.4e-051739123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y C  C+k+Fs+   L  H+r+H
  XP_020700162.1 17 YYCRLCDKRFSSGRALGGHMRVH 39
                    89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MVILKKKKLL EQEEEKYYCR LCDKRFSSGR ALGGHMRVHE MFNIQHILHQ NEGSSTTGTE  60
GESSDDNRHL TSHICQNCCE EFCSLKSLSK HCFRGHIGAG GDDGENDISN GLFTLHLPDL  120
ELLLHLLCLP KKSMSLIVLF GSPLSVQTL