PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020700191.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 275aa    MW: 30590.1 Da    PI: 8.5763
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020700191.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.2e-1371120255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+ h   Er RR+++++ f++L  llP +   p  K++K++i+  Av YIk L+
  XP_020700191.1  71 RELHICTERERRKKMRNLFSNLHALLPDL---P-SKVDKSTIVDGAVSYIKALE 120
                     88899***********************6...3.8****************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MSPIEGEAHM KAAWAFPNSD NTGGGEVAMK TSSKLRVGEK RKRNGDGKRL LGSKCGGENI  60
EDLRIYDESN RELHICTERE RRKKMRNLFS NLHALLPDLP SKVDKSTIVD GAVSYIKALE  120
QTLQNLQKQK LRQLMVDLSP TATATLESKV AFMADDQGKN SSSGNATATA AVVPRLPVCF  180
QTWISPNVVL NAAGEEAFIS ICCVKKAGFL SSMLFLLDKY KVEVVSAHFS SDNYSRSMCM  240
MHARVRRESD HFPETLMIEE TYKSVVGEMI AWLYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-29bHLH family protein