PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020700266.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 243aa MW: 27478 Da PI: 6.8839

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020700266.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	5.8e-32	17	71	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wt +LHe+Fv+av++LGG+ekAtPk +++lm v+gLtl+h+kSHLQkYRl XP_020700266.1 17 KPRLKWTRQLHEQFVDAVTELGGAEKATPKLVMRLMAVPGLTLYHLKSHLQKYRL 71 79****************************************************8 PP
2	Myb_DNA-binding	58.4	1.7e-18	19	70	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT +++e++vdav++lGg t+k+++r m g+tl+++ks++qky+ XP_020700266.1 19 RLKWTRQLHEQFVDAVTELGGAekaTPKLVMRLMAvPGLTLYHLKSHLQKYR 70 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MPNHVDQQGL VLSVDAKPRL KWTRQLHEQF VDAVTELGGA EKATPKLVMR LMAVPGLTLY 60 HLKSHLQKYR LAKNRDPSTV NDDKKTNDEL KDTDDKSQPE FNEAMLQQIQ IDVQRKLQEQ 120 IEVQKHLQLR IEAQGKYLHS VLKKAQETLA GYSSTSLGTE AARTELSELV SAMETECRSS 180 SFNNGGSISK RNQNADSSMD SCLTSELFEL REKYAGYHKL EASPCSNITV KNRGELQEFD 240 LNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	7e-65	G2-like family protein