PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020700475.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Dof

Protein Properties

Length: 206aa MW: 21898.8 Da PI: 4.8317

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020700475.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	69.3	5.9e-22	3	41	23	61
zf-Dof 23 nyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 nys sqPr+fC+aCrr+Wt+GG+lrn+PvGgg+++++++ XP_020700475.1 3 NYSRSQPRHFCRACRRHWTEGGTLRNIPVGGGCKNKRRK 41 9********************************998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MPNYSRSQPR HFCRACRRHW TEGGTLRNIP VGGGCKNKRR KITPTATSFA AAAGGNPIAP 60 VVGELKDPIF PDILRHVLLN QPPQPPLESP SMDTMEGLFD AALSKSSLTF MEDFSGVSSG 120 LALSAGEIPF MAAASTSHQN LSGVQDVSGG CGDGFLGMMD ASAASIWVKK ETVFPASYWD 180 FWDGGAEDLN IGAVAEEIVA ETLLPE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	1e-17	Dof family protein