PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020700493.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YB
Protein Properties Length: 216aa    MW: 22598.9 Da    PI: 6.3958
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020700493.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB184.77.3e-5825120297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+++re+ege
  XP_020700493.2  25 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREMEGE 119
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_020700493.2 120 K 120
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MADSDNESGG HNNSNAAINS EYSSREQDRF LPIANVSRIM KKALPANAKI SKDAKETVQE  60
CVSEFISFIT GEASDKCQRE KRKTINGDDL LWAMTTLGFE EYVEPLKIYL QRFREMEGEK  120
GGGGSQPQKD GGGGGGGNGG VGGGAMGMGS NAGGFSGGAA GMYGGSGMMM MGQQMYGSPP  180
PSSYQHHHHH HEIGISGDGG GGWSTSPTAS GRQGRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-73NF-YB family protein