PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020700651.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 338aa    MW: 38160.4 Da    PI: 5.7071
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020700651.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.2e-10150192754
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++E++RR+r+ ++fe L++l+P++     +K++ a+i+  ++++Ik+L
  XP_020700651.1 150 KNEKQRRERLGKKFELLKSLIPNP-----TKPDRATIVADTIDHIKEL 192
                     78**********************.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MFNPQSSSFI GGLALISDAS EAIMASQSTD LSLMVESGFD YLRQFERLNG ANLTTFDPSG  60
QGDSPVYRML GPTNFHSPSE ALMRDFSMYG TSVMPAILYD PAVAMNVNLE AAGFNHEYDV  120
YGGQLENCEI ECRKQKEMMM RGLEEYGTQK NEKQRRERLG KKFELLKSLI PNPTKPDRAT  180
IVADTIDHIK ELLRTVDELK ILVGKKRSKN ARSIKLEIQN DVHCDMESSS IKSNIDESDH  240
GLNGSMRSSW IQRRSKSTFI DVRIIEDEVY IKLEQRKRVD CFLIVSRVLD ELQLELLHLS  300
CGNVGDNHIF MISTKTNYEG SPVYATSVAR RFIEAMGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06170.26e-40bHLH family protein