PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020700951.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 198aa    MW: 21803.6 Da    PI: 5.7812
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020700951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62e-2070121155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GVr+++ +g+++AeIrd + +g   r++lg+f+t+eeAa a+++a+ +++g
  XP_020700951.1  70 SSYRGVRRRP-WGKFAAEIRDSTRRG--VRVWLGTFDTPEEAALAYDQAAFSMRG 121
                     67********.**********43343..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MDSSPFFQST ISHPSSKSSL ESSQAPLLPF NFDDSDDMLL LNMMLVSAAS SADAEDSTFA  60
AGSQPKKQSS SYRGVRRRPW GKFAAEIRDS TRRGVRVWLG TFDTPEEAAL AYDQAAFSMR  120
GPMAMLNFPV EKVKESLRGV TYGEEGCSPV VALKRRHSVH RKSAAKRKEV ESVVELEDLG  180
AEYLEELLRV SDVPASCC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-54ERF family protein