PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020701043.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 247aa MW: 28249.1 Da PI: 7.9101

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020701043.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	160	9.1e-50	12	139	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 ppGfrFhPtd+el+ +yL+kk++++ +l +i ++d+yk++Pw+Lp+k+ +++ew+fFs+rd+ky++g r+nra++sg+Wka g+dk++ls+ XP_020701043.1 12 PPGFRFHPTDQELIIHYLRKKITASFPPLPAIIGDIDLYKFNPWELPEKALFGQEEWFFFSPRDRKYPNGFRPNRAAASGFWKAIGTDKPILSSg 106 9***********************999899***********8877899***********************************96 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e g+kk Lvfykgr pkg+ktdWvmheyrl XP_020701043.1 107 GSECLGVKKALVFYKGRPPKGVKTDWVMHEYRL 139 66779************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MECCALQGSR FPPGFRFHPT DQELIIHYLR KKITASFPPL PAIIGDIDLY KFNPWELPEK 60 ALFGQEEWFF FSPRDRKYPN GFRPNRAAAS GFWKAIGTDK PILSSGGSEC LGVKKALVFY 120 KGRPPKGVKT DWVMHEYRLL DNNPSHHLLH KEKGSMRLDD WVLCRVHQKG SFIGENIENL 180 EIRSSKPAII NSNESQGRQA VTNEYEISNY IDWNNPQLLS YCLESSFGGK NNEEILISDS 240 VVGWSQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	7e-77	NAC family protein