PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020701532.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 311aa    MW: 34212.4 Da    PI: 6.6061
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020701532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH491.1e-1582128455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  XP_020701532.1  82 VHNLSEKRRRSRINEKMRALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 128
                     6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MDSSYGGGPS CSSAAQEQIS RFFSEQVPLP FSSSSAGFRE RSGYPITEKL ELEVEEAAEE  60
VAKPVASTRS GSGSKRSRAA EVHNLSEKRR RSRINEKMRA LQNLIPNSNK TDKASMLDEA  120
IEYLKQLQLQ VQMLSMRNGL NLHDMYLSGM VQSPLQASEI CMGFNGDNRI ALNMGKGMLP  180
LNQESFSQNQ HASSHQIQTI VTSLAASQET FQLPMSAEML ADGIVLQQQL DAGSSARNTT  240
DRVKTSVPHF GGECSVLEDH VQLQTGIIGR EGTQNMLRRS SDLQFNIHHL HGLQPRRSLG  300
GSDIKAESLE F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.14e-38bHLH family protein