PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020701979.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 349aa    MW: 39716 Da    PI: 4.61
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020701979.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-19112161255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++G+r+++ +g+W+AeIrdp++     r++lg+f+t+e Aa+a++aa++k +g
  XP_020701979.1 112 QFRGIRQRP-WGKWAAEIRDPRK---GERVWLGTFDTPEAAARAYDAAARKVRG 161
                     69*******.**********954...3************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MCGGALISDF IPSARQRRAT GDYLWADQGK KKKKRNGGRK ISEAEFDDDF EADFREFKDE  60
EGVDELEEFT SVEPYAFRPK PATLSREDSA VLKRSEFDGD SDKSSKRKRK NQFRGIRQRP  120
WGKWAAEIRD PRKGERVWLG TFDTPEAAAR AYDAAARKVR GKKAKVNFPD EASKPAQNHP  180
PKQTVSKTLE GNSTEELNFN ESLDCFSNAN YNFYSSLGMC EEIIEPMKLE KIYSEQESNS  240
LNCSDYGWEN EFKSPEISSI RAPTVGDLKS GFMEEGGEHK KLKTNSDDDL KFPEDLPAFE  300
PNMKFLPFSE ETLDGSLDSL LGTEMIQDGT LNFMDLWNFE DIPISESIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.15e-36ERF family protein