PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020702221.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ZF-HD
Protein Properties Length: 199aa    MW: 22739.1 Da    PI: 9.3431
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020702221.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer88.47e-282170558
     ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                     Y+eClkNhAa++Gg+a+DGCgEfmp      +a++lkCa CgCHRnFHRre +
  XP_020702221.1 21 IYRECLKNHAAAMGGQAFDGCGEFMPG----FKAETLKCAVCGCHRNFHRREIS 70
                    6*************************8....5678****************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MDFSLVSYIP CPASEELTGG IYRECLKNHA AAMGGQAFDG CGEFMPGFKA ETLKCAVCGC  60
HRNFHRREIS PGHSSFVIHS PAPVAFFPPP DPPFHTFLPP ESPVRRESET PPRRQEGFIR  120
KRYRTKFTTE QKEKMRIFAE KLGWRIQKHD YEALEKFCIQ IGVKRHVLKV WMHNHKNNFS  180
SPSGGERDAN SPPPPFIRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-44ZF-HD family protein