PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020702224.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 255aa MW: 28594.3 Da PI: 7.9956

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020702224.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.5	1.3e-32	19	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv a+e+LGG++kAtPk +l++m+vkgLt++hvkSHLQ+YR+ XP_020702224.1 19 PRLRWTPDLHHCFVYAIERLGGQDKATPKLVLQMMDVKGLTISHVKSHLQMYRS 72 8****************************************************7 PP
2	Myb_DNA-binding	48.8	1.6e-15	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v a+++lGg t+k++ ++m kg+t ++ks++q+y+ XP_020702224.1 20 RLRWTPDLHHCFVYAIERLGGQdkaTPKLVLQMMDvKGLTISHVKSHLQMYR 71 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MVSCGRNGAV RQYNRSKVPR LRWTPDLHHC FVYAIERLGG QDKATPKLVL QMMDVKGLTI 60 SHVKSHLQMY RSMRNDLSRQ DVQLIEERRR SCEGNDGVAY KQNHDDVFLP SSKPNETQPH 120 FMLSSLPVLK RSMESSNGIC GIFTTLCNFH DYMQRKNHTF GFYMVEESHT SKGIKQNGCQ 180 TPTSTITCRS DEEDELSLSL SLSLKPKHGS SASSACESSC CAFPAAGRNH TESLHQSNDC 240 CLNLDLSMSA CSSYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	7e-33	G2-like family protein