PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020702260.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 365aa    MW: 41070.2 Da    PI: 6.3197
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020702260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH223e-07281321954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P        K++ a++L +A +Y+k L
  XP_020702260.1 281 ARHRRERISERLRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 321
                     599*****************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MKFGIDFTKL RSQRVNHHTD LFLMDNSRWD NQSIIRDEMI SNLSCIWSRQ YDNFSEPNCD  60
YCVVGGKVEM MINEALLSSN LDLLHGNLNN EAAVDILQNQ EAISIDTNSI VIPNLVSEAV  120
MRETLSASYQ LCSLPPSFTD HNFTSSEELQ VIRDTCNNTP SGTDSDNYAS HSSNSNLEQP  180
PKERLSYKRK REEHSSSLLN SSSSTADGGF QIVFGDDPTK CKKLRFEIEK YEPDTEAIVQ  240
VKEMIYRAAA LRPVSLEPEA AVAKPKRKNV RISSDPQTVA ARHRRERISE RLRVLQKLVP  300
GGSKMDTASM LDEAANYLKF LKAQVSALEK LGNSNRSVDH TMKSMLNSFP VTSSCQSFPM  360
QTLFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.15e-42bHLH family protein