PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020702282.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 281aa MW: 31260.2 Da PI: 9.6274

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020702282.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106	2.1e-33	29	83	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LH+rFv+av++LGG++kAtPk++l++m++kgLtl+h+kSHLQkYRl XP_020702282.1 29 KPRLRWTPDLHDRFVDAVSKLGGPDKATPKSVLRVMGMKGLTLYHLKSHLQKYRL 83 79****************************************************8 PP
2	Myb_DNA-binding	65.7	8.2e-21	31	82	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav +lGg+ t+k++ r mg kg+tl+++ks++qky+ XP_020702282.1 31 RLRWTPDLHDRFVDAVSKLGGPdkaTPKSVLRVMGmKGLTLYHLKSHLQKYR 82 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MFESFVHIEK SYQYGSTEAA AAALSRDPKP RLRWTPDLHD RFVDAVSKLG GPDKATPKSV 60 LRVMGMKGLT LYHLKSHLQK YRLGRQARKE TGLDGIKDGK PSKASFNSSA CNIVSSGSTG 120 GEIQLTEALR YQIEVQSKIH EQLEKLQSRI EAQGKYLQAI LDKAQKGLSF DTNNNNKNME 180 AARAQLKDFN QALSGLMDNV NQFCISKGST ELDKVTANVS LNSSPTNSAF RLYQEEESPH 240 NLKFSSHRGS LLLDLNLKGN QDFFSGNIGN DLDPQMHLQI R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	5e-57	G2-like family protein