PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020702456.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 215aa    MW: 22413.7 Da    PI: 8.1432
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020702456.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.000486587123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C++C + F ++  L  H++ H
  XP_020702456.1 65 YECQYCFRGFANSQALGGHQNAH 87
                    99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MLSSGFQSHA ANPKLKLFGY SMPENADSAI EHPAAVLPEQ NPGSSSSSST TTASGVGAAA  60
DARKYECQYC FRGFANSQAL GGHQNAHKKE RQHLKRTQLH AAAAAAAANG ADFFNYPRGA  120
NPMVTAFSPP PHLLPDSSNW VYFSRAVQPL HVSHGCVFSS PVQADGPRGS GTGHKTHPAV  180
AGPVSQNRFS SPTEQAGSDD SFGLDLQLSL APAGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41940.11e-13C2H2 family protein