PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020702621.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 226aa    MW: 25927.1 Da    PI: 6.359
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020702621.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.00034971123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y C+ C + F++   L  H+++H
  XP_020702621.1 49 YACSFCRREFRSAQALGGHMNVH 71
                    89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MCSRRNSLCR PLLPYFNYFP STDVSWEEQA FAKDSSGDLG GCVWPPRSYA CSFCRREFRS  60
AQALGGHMNV HRRDRARLKE ASSHRSETDE DVQPFYPFCS YIYSPNPNYD ALGVEVASFL  120
LAKEEIYSQQ SIVSVSLEIG RENWKTGELD HRRIRDFVYG DCDISSKKVK TDLILTSDRK  180
DTPNNLQNFK SEVIKLSHNP VEELDLELRL GDSPKVKESR SIIAIE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.15e-28C2H2 family protein