PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020702778.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 198aa    MW: 21677 Da    PI: 7.7624
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020702778.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-1859109155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a++ ++g
  XP_020702778.1  59 PSYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALTIKG 109
                     57*****998.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MEEPLPHPSD LIITSSSSSS SSSPSSSSSP SFSFTSTSST SPATPTESKK RSKDAKEPPS  60
YRGVRMRNWG KWVSEIREPR KKSRIWLGTF PTAEMAARAH DVAALTIKGQ SAYLNFPELA  120
AELPRPATTT PKDIQAAAAK AAATTYTTHS TLQPQRSPNT TSSSNGNDDS LFDLPDLLLD  180
WRSWVLPEAD DPLLWQYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.13e-45ERF family protein