PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020702814.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 236aa MW: 26542.4 Da PI: 6.6671

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020702814.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	70.2	5.5e-22	37	151	30	117
NAM 30 leevikevdiykvePwdLp.k.............................kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l +i+ev+++k+ePwdLp k k ++ke+y F++ ky+tg r+nrat+ yWk+tgkdke+ XP_020702814.1 37 L-LAIAEVELNKCEPWDLPsKnlhssshvslsassiiyililfrfnsersK--IgGSKECYLFCELGLKYSTGLRRNRATNVEYWKSTGKDKEIR 128 3.369************5489*********999999988776432..236779******************************** PP NAM 94 skkgelvglkktLvfykgrapkge 117 + ++ l g+kkt+vfykgrapkge XP_020702814.1 129 R-ENILLGIKKTIVFYKGRAPKGE 151 9.999***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MVEEVERVAE KEECMFLLGK SHGSHLLSST WALAIALLAI AEVELNKCEP WDLPSKNLHS 60 SSHVSLSASS IIYILILFRF NSERSKIGGS KECYLFCELG LKYSTGLRRN RATNVEYWKS 120 TGKDKEIRRE NILLGIKKTI VFYKGRAPKG EDGVVAFEHN KWVLCRVFEK GLPRKENKAF 180 GLANIEEEMT QGVPLPPLMN AQVTSFPDSL YEGGAFNFCS EASSSFYDGN DDLLFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18400.1	4e-30	NAC family protein