PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020703093.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 245aa    MW: 26967.3 Da    PI: 4.2079
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020703093.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH247.1e-08220243730
                     HHHHHHHHHHHHHHHHHHCTSCCC CS
             HLH   7 erErrRRdriNsafeeLrellPka 30 
                     + Er+RR ++N++f+ Lr+l+P++
  XP_020703093.1 220 ATERQRRVQLNEKFAALRSLVPNP 243
                     78********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
GEAQRRTSAM FEDLSYLDPL HVAEEPIIPS SLVDSSSSNE YLLEDHKILP SFNLDGSTAQ  60
ADLGLDHINN QLSFDVEVAS LPPPSFELSN WDICYSDQLA PPLSLPQPLY PDPNYFPGGP  120
SVPDLLNMLE LPRCAANPPT TSSISFDGIS MLYEPMIGAS NSMGMENYGL LPQNYGLFCG  180
LEEREGGMMG SGEGERRKFD GVLECRRELM AKGEMKGSFA TERQRRVQLN EKFAALRSLV  240
PNPSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.18e-11bHLH family protein