PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020703448.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 257aa MW: 28507.2 Da PI: 7.1662

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020703448.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.9	2.3e-33	26	80	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLH+rFv+ v+qLGG++kAtPk+il++m+vkgLtl+h+kSHLQkYR+ XP_020703448.1 26 KPRLRWTAELHDRFVDSVAQLGGPDKATPKAILRIMNVKGLTLYHLKSHLQKYRM 80 79****************************************************7 PP
2	Myb_DNA-binding	62.3	1e-19	28	79	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++vd v+qlGg+ t+k+I r m+ kg+tl+++ks++qky+ XP_020703448.1 28 RLRWTAELHDRFVDSVAQLGGPdkaTPKAILRIMNvKGLTLYHLKSHLQKYR 79 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MYLNGGGLEG TSLPADASLV LTSDPKPRLR WTAELHDRFV DSVAQLGGPD KATPKAILRI 60 MNVKGLTLYH LKSHLQKYRM GKQSSKDLEN SIDGNAVSAA VESQGSTCAT STLATPEHND 120 GCNEAMRVQM ELQRRLHEQL EVQRSLQLRI EAQGKYLETI LERACNALVD QNLRTNEIES 180 SKQKSPEFAN RETQGCLGFS IEPLHLPFLS EITGACPEAK SGNRIQQMNK RPRTMLFNGQ 240 LNFGASLHDE QSWMSSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	2e-78	G2-like family protein