PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020703472.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family HB-other
Protein Properties Length: 299aa    MW: 33690.9 Da    PI: 6.7775
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020703472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox16.41.6e-054204056
                    -HHHHHHHHHHHHHHHH CS
        Homeobox 40 terqVkvWFqNrRakek 56
                    + +qV +WFqNrR+ ++
  XP_020703472.1  4 QPKQVLNWFQNRRYAHR 20
                    679**********9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MIVQPKQVLN WFQNRRYAHR AKVKDPAKLN VSLMPRDDPA QHRNVAPPLP ISQGSNPLEN  60
VEVEFEAKSV RDGAWYDVSA FLSYRMFETG DPEVRIRFSG FGIEEDEWIN VRKCVRQRSL  120
PCEAGECVAV LPGDLILCFQ EGKEQALYFD AHILDAQRRR HDVRGCRCRF LVRYDHDQSE  180
EIVSLKKICR RPETDSRLEL LQSRAPGSAD SSRSTKDPSQ STLSKDQNVI SRRTRKQRKL  240
VDVNVDEVMT IALPALSNLH VSSAAIQTVN EAEAIEDATN AAAANDSVSN SLDVKTEGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.17e-86HB-other family protein