PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020703498.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 232aa    MW: 25715.9 Da    PI: 8.3404
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020703498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.4e-20116165255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    r  r +lg+f taeeAa+a+++a+ +++g
  XP_020703498.1 116 QYRGVRQRP-WGKWAAEIRDPR----RaVRKWLGTFETAEEAARAYDNAAIEFRG 165
                     6********.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MAFNQQLNFD NSQLHFPASL SPMQSTPLPS ISSRRLSHDQ ENSIIVDALV HVLSGEPKQT  60
APAISFPLAA DLPRCQVCGI GNDGCLGCHF FESTPAEKAE GGGIRERIRR RKKKNQYRGV  120
RQRPWGKWAA EIRDPRRAVR KWLGTFETAE EAARAYDNAA IEFRGARAKL NFPFPDQNST  180
GRQRSAVAAA ADSPLATTVA RGSAEEMGGF WDGLQELIKI DDMEPSDNWM MS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-33ERF family protein