PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020703546.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bZIP
Protein Properties Length: 362aa    MW: 39279.8 Da    PI: 5.3206
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020703546.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.22.1e-09166212551
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                     kr+rr   NR +A rs +RK  +i  Le++v++L++e ++L  +l  
  XP_020703546.1 166 KRARRILANRQSAARSKERKARYISDLERRVQTLQTEATTLSAQLTL 212
                     9****************************************988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MVLPPAVATG ATGTSLVPNC SPLHRRARSE FFLRIPEDLG LSSGDPMETG SFEEIGSEED  60
LFSTYIDIEK IGCKLEGSGS GSEDGVGQDR VAESSGGDQE PRTGNAGDGE SAETSRAKHR  120
HSNSLDGSSV SSMAARKGEV VFGEILEAKK AMTAEQLAEL TAIDPKRARR ILANRQSAAR  180
SKERKARYIS DLERRVQTLQ TEATTLSAQL TLFQRDTTGL AAENAELRLR LQTMEQQAQL  240
RDALNEALKK DVERLKIATG ETSNTAESND VGLNPLTFNP PFFPVPQPQT SFPLQSLQLP  300
PPSFHQLQPT TTNFPLLSYS HPLSDTIPHD HLGRLRRLDI SKGPLIVKSE SSISAGESSN  360
IF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.12e-73bZIP family protein