PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020703590.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family DBB
Protein Properties Length: 199aa    MW: 21760.5 Da    PI: 6.7184
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020703590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box24.46.1e-08434535
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHk 35
                    +C+ +e+ ++ lfC  ++  lC+ C ++ Hk
  XP_020703590.1  4 ICDVCESAPAVLFCSADEAALCRPCDDKVHK 34
                    8***************************995 PP
2zf-B_box22.52.4e-075286236
        zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg 36
                    e ++C+ +e  ++ ++Ce +++ lC +C +  H g
  XP_020703590.1 52 EVPRCDICEVSPAFFYCEIDGSSLCLQCDTIVHVG 86
                    789******999*****************999955 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MRIICDVCES APAVLFCSAD EAALCRPCDD KVHKCNKLAG RHVRVGLADP SEVPRCDICE  60
VSPAFFYCEI DGSSLCLQCD TIVHVGGKRT HARYLLLRQR VEGQAEDSSL QNKYHSANHM  120
DLDHLSHSVV REKQQNHEVS PPTLIANNDH HGNSDSKMID LNKRPSRTGG QDSNMQGAGA  180
SLTTTIVAPV GSLTRDAEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.17e-68DBB family protein