PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020703794.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family G2-like
Protein Properties Length: 341aa    MW: 37417.1 Da    PI: 8.3421
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020703794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.51.9e-30164219156
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                     k+r++W+p LH++F++a+eqLGG + AtPk+i+e+m v+gLt+++vkSHLQkYRl+
  XP_020703794.1 164 KQRRCWSPALHRKFLNALEQLGGFHSATPKQIREMMMVDGLTNDEVKSHLQKYRLH 219
                     79****************************************************97 PP
2Myb_DNA-binding35.13.1e-11166217148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W++ ++ ++++a +qlGg    t+k I ++m   g+t  ++ks++qky+
   XP_020703794.1 166 RRCWSPALHRKFLNALEQLGGFhsaTPKQIREMMMvDGLTNDEVKSHLQKYR 217
                      568*****************66*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MVMAEWKQRL SDFISALEEE RRKIQMFSRE LPLCLQLVNE AIDNLERQVT SDEVFGDKSV  60
MEKGASNCKQ DWLRSAQLWS PAAADKPPAE GGTLRKPVAV NATRVGRAFQ PFEKSKLMPA  120
VLAPAEAPAV SSTLGGKRRD GGEDLEKKEA EEGRSLATAQ SNRKQRRCWS PALHRKFLNA  180
LEQLGGFHSA TPKQIREMMM VDGLTNDEVK SHLQKYRLHM RRPLVTVQSS SSNSTQNQPH  240
FVLVGSIWVP PTAAAPAAAT AQQAEGSSAA LNGIYSPVPS LPLEFGSEEE QPNKKQQTSK  300
HPFMSLHSQQ RCSQDDGSLV DDAATISNSS STSFSSQTTS V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68670.13e-58G2-like family protein