PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020703944.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Dof
Protein Properties Length: 188aa    MW: 20957.4 Da    PI: 8.9738
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020703944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof102.52.5e-321673462
          zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                      lkcprC s+ntkfCyynnysl+qPr+fC++C+r+Wt+GG lrn+P   g+rknk+++
  XP_020703944.1 16 PPLKCPRCYSANTKFCYYNNYSLTQPRHFCRTCHRHWTAGGVLRNIPAS-GSRKNKRQK 73
                    6789*******************************************75.667777654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MEGLEIPKAS KTQKAPPLKC PRCYSANTKF CYYNNYSLTQ PRHFCRTCHR HWTAGGVLRN  60
IPASGSRKNK RQKTTTTTNA STSAAAGHFP SITTPAVTEN NDRFENLLTR NFRPFEFEFG  120
TVSSGFSFPV NSTSLFPSTD YSFGRSKEGL EMDESKFSTS FSVEESLVFP AGFLDFWNGG  180
VDFMAGGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G45610.11e-26Dof family protein