PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020703977.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 342aa MW: 37722.9 Da PI: 8.3454

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020703977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.3	2.9e-32	172	225	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_020703977.1 172 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 225 9****************************************************7 PP
2	Myb_DNA-binding	47	5.9e-15	173	224	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_020703977.1 173 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 224 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MELFPAQPDL SLQISPPNNT KPSSAGWSAT AEDTINLGFW RRALNSNSTA TPLPPSNPPS 60 SSSSSFSIDA ADLSLSNPSF PHHSNHHLHY HHHHQHPTFL HEPSLPPISG IPVYHCPPSF 120 PFPPRHYHSY NSPSTTMAAS NNPLAALSRS AALSSSSRFL PRFPTKRSMR APRMRWTSTL 180 HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD KAASPGHENE 240 PIEIFDDNLL DLNNVVRGSE SSVQNGRPTG QNGIHSYGLW SNSSRGGLFH EKQKESSTGS 300 MSSLESEMQS RSFEMISDFN SSCISDTSSK KPNLEFTLGR PH

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MELFPAQPDL SLQISPPNNT KPSSAGWSAT AEDTINLGFW RRALNSNSTA TPLPPSNPPS  60
SSSSSFSIDA ADLSLSNPSF PHHSNHHLHY HHHHQHPTFL HEPSLPPISG IPVYHCPPSF  120
PFPPRHYHSY NSPSTTMAAS NNPLAALSRS AALSSSSRFL PRFPTKRSMR APRMRWTSTL  180
HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD KAASPGHENE  240
PIEIFDDNLL DLNNVVRGSE SSVQNGRPTG QNGIHSYGLW SNSSRGGLFH EKQKESSTGS  300
MSSLESEMQS RSFEMISDFN SSCISDTSSK KPNLEFTLGR PH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	3e-46	G2-like family protein