PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020704127.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 138aa    MW: 14972.2 Da    PI: 8.4844
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020704127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.83.1e-094679238
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38
                     y+GVr+ +  g+++AeIrdp ++g   r++lg+f t
  XP_020704127.1 46 NYRGVRQQP-LGKFAAEIRDPAKDG--VRIWLGTFET 79
                    59*******.8*********98886..********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MVIYLTLHDA FRGDWLPEGG SATAFVLPPP VKPDSPDIGA PAKGKNYRGV RQQPLGKFAA  60
EIRDPAKDGV RIWLGTFETR GRKGIIAEFK ELASSLPKEM VAMQSELEKL KDFSSEIHWL  120
ASSSAVFICI IATGGNAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.11e-20ERF family protein