PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020704522.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 271aa    MW: 30293.5 Da    PI: 4.9523
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020704522.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.3e-163786255
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y GVr+ + +grWvAeI+       ++ r +lg+f+taeeAa+a+++a+  l+g
  XP_020704522.1 37 RYMGVRQSP-SGRWVAEIKG----TaQKIRQWLGTFDTAEEAARAYDEAACLLRG 86
                    799******.7******655....2456999*******************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MVQKRKTKDS SSDKKIEAFA SSSSSTAANT IEQPRKRYMG VRQSPSGRWV AEIKGTAQKI  60
RQWLGTFDTA EEAARAYDEA ACLLRGANTR TNFWPRSSGW PGGSDSASSM LPAKVFNHLL  120
RHLETQQAAH AQTSSPPPPS MPLPSVLQPA PEQQQFDNQS EIEPINRIAY GDQLLSDVSV  180
SSTTQSGEEN EFSMTYCNTE SICTHDDQQK VKDDEVDKSV NFSDTHLRLE EELSGFYESF  240
EISMVMEEAR RKAEMGTYEY WLMLSSAAKN V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-19ERF family protein