PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020704747.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

BES1

Protein Properties

Length: 328aa MW: 35303.2 Da PI: 7.4403

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020704747.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	202.3	1.4e-62	2	140	1	149
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 ++++r ptwkErEnnkrRERrRRaiaakiyaGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+e++e++g+sa asp+ss+q XP_020704747.2 2 TSGTRLPTWKERENNKRRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPERMEIVGCSAPASPCSSYQ 96 5899******************************************************************************************* PP DUF822 96 .sslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149 s ss+++sp++s s+ +++ ++ +a+sl+p+l++ls++sss XP_020704747.2 97 pSPYASSSFPSPASS--------SYFTSANNATT---DANSLIPWLKNLSSTSSS 140 444455555555543........33333332222...234555555555554443 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MTSGTRLPTW KERENNKRRE RRRRAIAAKI YAGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVEPDGTTY RKGCKPPERM EIVGCSAPAS PCSSYQPSPY ASSSFPSPAS SSYFTSANNA 120 TTDANSLIPW LKNLSSTSSS SASSSKPPSL HNLSIHHGSI SAPVTPPISS PTAQSPRIKT 180 DWDNPMQPSW PVAASHYASF LQSSTPPSPG QAWLSGIHIP TSSPTSPTFS LIMPNPFGLY 240 QEGVASAGSS RMWTPGQSGM CSPVMPPSDV QMSDDASDEF AFGSCSNENG QAQQLGVVKP 300 WEGERIHEDC GSDDLELTLG SSRTRADP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-83	BES1 family protein