PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020705067.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 231aa MW: 26844.4 Da PI: 7.1942

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020705067.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.2	3.8e-54	7	134	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 l pGfrFhPtdee++++yL +kv +++++ +i e +++ePwdLp k++ +ekewyfF+krd+ky+tg r+nrat+sgyWkatgkdke+++ XP_020705067.2 7 LLPGFRFHPTDEEIITHYLLEKVIDQSFKS-IAIGEGSFNECEPWDLPGKANMGEKEWYFFCKRDRKYPTGMRTNRATSSGYWKATGKDKEIFKG 100 579**********************999.88***********99999************************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg lvg+kktLvfy+grap+g kt+Wvmheyrle XP_020705067.2 101 KGVLVGMKKTLVFYSGRAPRGMKTKWVMHEYRLE 134 ******************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MDDSLHLLPG FRFHPTDEEI ITHYLLEKVI DQSFKSIAIG EGSFNECEPW DLPGKANMGE 60 KEWYFFCKRD RKYPTGMRTN RATSSGYWKA TGKDKEIFKG KGVLVGMKKT LVFYSGRAPR 120 GMKTKWVMHE YRLEGKYQYN NLSTPHQDEW VVCKVYNKKD TKISTGQQEV AERMNSSFVD 180 DLLVDNPDQL PPLTNSPFFY NSRDIVDYNS FDLHSPSLDF GPLDHRLTLI F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	9e-90	NAC family protein