PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020705492.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 383aa MW: 42806.3 Da PI: 5.9673

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020705492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.8	1.9e-31	253	308	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF+ a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_020705492.1 253 KARRCWSPELHRRFIIALQQLGGAQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 308 68****************************************************97 PP
2	Myb_DNA-binding	39.1	1.7e-12	255	306	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ +++ a +qlGg t+k I + m g+t ++ks++qky+ XP_020705492.1 255 RRCWSPELHRRFIIALQQLGGAqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 306 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MGSLAPELGL DLKLFTKRTI FSCLKDEIPD GSRASKLEDF ARRLEEERRK IEAFQRELPL 60 CMLLLADVIG GLKLEMDQCQ SGGSDDCVLE EFIPLQTRSD GYKEEKKAIN LEEKSKEKME 120 WMSSAQLWSD NLSYESIDCK EYSQEKKDEG SHSRRDCDAL SLESKSDGAF LPFTAMPAPR 180 KEEENLSIPL PDLSFVPLPI KVPCSAPMAV TREEDNHSSG LNSKAVTIAS SSTGNNQLGL 240 MPQQQYQQHP QRKARRCWSP ELHRRFIIAL QQLGGAQVAT PKQIRELMKV DGLTNDEVKS 300 HLQKYRLHTR RVPTSAANQV NRPVVMVGGL WVSQDHCSTS QQNASQSRSP QGPLQLTCTA 360 QALSVTGGDS CDDDGKSESY SWK

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MGSLAPELGL DLKLFTKRTI FSCLKDEIPD GSRASKLEDF ARRLEEERRK IEAFQRELPL  60
CMLLLADVIG GLKLEMDQCQ SGGSDDCVLE EFIPLQTRSD GYKEEKKAIN LEEKSKEKME  120
WMSSAQLWSD NLSYESIDCK EYSQEKKDEG SHSRRDCDAL SLESKSDGAF LPFTAMPAPR  180
KEEENLSIPL PDLSFVPLPI KVPCSAPMAV TREEDNHSSG LNSKAVTIAS SSTGNNQLGL  240
MPQQQYQQHP QRKARRCWSP ELHRRFIIAL QQLGGAQVAT PKQIRELMKV DGLTNDEVKS  300
HLQKYRLHTR RVPTSAANQV NRPVVMVGGL WVSQDHCSTS QQNASQSRSP QGPLQLTCTA  360
QALSVTGGDS CDDDGKSESY SWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	8e-57	G2-like family protein