PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020705498.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 263aa    MW: 28803.5 Da    PI: 9.0707
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020705498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.00047113134223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     kC+ Cgk+F++   L  H  +H
  XP_020705498.1 113 KCSECGKTFPSYQALGGHKASH 134
                     7**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MDIWEFGDEL GRMTKVRNMM ATAGRTSNNR VENLCPLETT NSTAGRISSD GSRLPTEGMT  60
KRKRSKRYPR MFDHPPTEEE HLAYCLLLLS RDTGSSAAIN LRSHFLPPNL ERKCSECGKT  120
FPSYQALGGH KASHRKPDSL AAVAQVDDHI SVGSPSTSIA GGKIHQCLIC LKAFPTGQAL  180
GGHKRCHYDG TIGSAAGYGS SGSAATSWVS EVRSAGIRRF DLNVPPVLDF GVESKRRWWA  240
LDDEDEVQSP ISYKRPRLPV TAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.14e-43C2H2 family protein