PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020705511.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 209aa    MW: 22213.1 Da    PI: 8.4976
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020705511.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.000387698123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    +kC+ CgksF++   L  H  +H
  XP_020705511.1 76 HKCSLCGKSFPSYQALGGHKTSH 98
                    79**********99998888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MVTEAMESPE YKVSPLPTSP SSSNSSSDEP KFPLLQTKRK LKRSNLIPQP PSEEENLALC  60
LLMLSGSQSP PQILSHKCSL CGKSFPSYQA LGGHKTSHRK STPATATEDR PSAGSPSASA  120
MSGGGRVHQC SICQKTFPTG QALGGHKRCH YDGTIGSAAG SGHRGFDLNL PPVPEIGLEL  180
GGRCNWISEE EAEVQSPISV KKPRFFLAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.16e-41C2H2 family protein