PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020705672.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 311aa MW: 34530.9 Da PI: 9.0622

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020705672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.1	7e-32	92	145	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_020705672.1 92 PRMRWTTSLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 145 9****************************************************7 PP
2	Myb_DNA-binding	48	2.9e-15	93	144	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ XP_020705672.1 93 RMRWTTSLHAHFVHAVQLLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 144 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MTTATTATNF PDLSLQISPP AISFAADSRH FYGSLSSSTT DEADPTLSLV LEAISSPAPT 60 TNKPNLNNST HINGFKRSSR TGHGGKRSSR APRMRWTTSL HAHFVHAVQL LGGHERATPK 120 SVLELMNVKD LTLAHVKSHL QMYRTVKTTD RGGAATGQGR GQSEMGLSQM LEVEGELPFD 180 QKAGINSSSY SLSAPTPPTP LHREPYFFSE ENGWNSSLMR RVPSLTLLRS DSFQCKENQQ 240 EKWGKEDRAL NSSMQLQMEE RNMAKERLIS SDSSKLMMKK MPDLEITLGR QSWQLEYTDS 300 SNVELTLLKC L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.2	2e-39	G2-like family protein