PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020705974.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB_related
Protein Properties Length: 476aa    MW: 51582.6 Da    PI: 6.4437
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020705974.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.51.3e-12105144344
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      +WT +E +ll++a++++  + W+ Ia+++g +++  qc++++
   XP_020705974.1 105 SWTDQETLLLLEAIEKYSDN-WNEIAKHVG-TKSKAQCILHF 144
                      7****************977.*********.**********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    
MLLLLMQPIS HSVYFLMFFF SYITLLLLDI SLLLIYHADL CTLNYSGIGL RLCATLPKHL  60
IQKLLAESIL CLDCFSDAKF ITGHSSLDFV RMDSKKDFTD VDGDSWTDQE TLLLLEAIEK  120
YSDNWNEIAK HVGTKSKAQC ILHFIALPME YGLLENIDVP RVDVSTVSSE VQNNGFSSST  180
SKSNAASSEP DSGDQLPFLS SANPVMSLVA FLASAIGPRV AASFASAALS VITKEDSRLN  240
SESVRDIVGS QGASINSVKQ KDDNIEDQAS NSLSCEHVRY AALCGLSAAA MKTKLFSDQE  300
EREVQRLAAN IISHQQLKRL ELKLKQFAEV ETFLLKECEQ AERTRQRISA ERVRLMSACF  360
APPGASTLAG SLAGSTGMAG SVAASTGNLS LRPTAMPVTS GQGNLTPVYG NSLPHPHSQF  420
MQRQQMYSFG PRLPLSAIHP PSSGSSQNAI FNSGMPNTST HHTLSRSSSG NNSNIG